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Intron Name: Anas_platyrhynchos_platyrhynchos_5_57799191_57800374_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57799191 - 57800374

Intron Length:

1184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGTT

5'SS Class:

strong_major

3'SS Sequence:

GGATTTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

AGTATAATAATA

Flanking Amino Acid:

NTQLCQPKQKIRIALKDWPE

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

87.2

27.3

Major BPS

0.75

78.6

Major PPT

72.3

0.5

65.4

45.3

Minor 5ss

38.7

-1.3

3.4

58.4

46.2

Minor BPS

-0.3

1.8

57.49

35.1

Associated Gene:

Gene:

SNAPC1

Ensembl Gene ID:

ENSAPLG00000002550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002577

57794992 - 57801179

6188