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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5782291_5790671_R

Intron Information:

Intron Rank:

130408

Intron Class:

major

Intron Phase:

Intron Coordinates:

5782291 - 5790671

Intron Length:

8381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTCCA

5'SS Class:

major

3'SS Sequence:

CTTTTAATTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

66.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.8

0.76

0.8

77.6

34.4

Minor 5ss

37.1

-1.5

2.9

48.7

41.1

Minor BPS

77.3

0.94

88.63

29.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035655

5778130 - 5841861

63732