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Intron Name: Anas_platyrhynchos_platyrhynchos_5_57892167_57917198_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57892167 - 57917198

Intron Length:

25032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGCTCT

5'SS Class:

major

3'SS Sequence:

ATTCTCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATGAT

U12 Branch Point Sequence:

AACTCAGTGAAT

Flanking Amino Acid:

MFLHERGIIYRDLKLDNVLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

68.8

38.6

Major BPS

59.1

0.23

1.3

51.7

43.9

Major PPT

79.8

0.67

0.9

73.5

36.3

Minor 5ss

41.5

-0.9

57.8

46.4

Minor BPS

43.1

-0.4

2.3

60.57

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028058

57889971 - 57917335

27365