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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5790780_5841696_R

Intron Information:

Intron Rank:

130404

Intron Class:

major

Intron Phase:

Intron Coordinates:

5790780 - 5841696

Intron Length:

50917

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

TAAGCATAAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.3

75.3

40.8

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

88.5

0.87

0.6

83.5

24.9

Minor 5ss

32.3

-2

2.8

43.1

43.7

Minor BPS

48.3

-0

67.11

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035655

5778130 - 5841861

63732

ENSAPLT00000020667

5704071 - 5841861

137791