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Intron Name: Anas_platyrhynchos_platyrhynchos_5_57987916_57992182_R

Intron Information:

Intron Rank:

135579

Intron Class:

major

Intron Phase:

Intron Coordinates:

57987916 - 57992182

Intron Length:

4267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGTGAA

5'SS Class:

major

3'SS Sequence:

TTTGTCTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

TCCGATTGCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.2

69.7

36.7

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

85.5

0.8

0.7

81.4

30.6

Minor 5ss

-2.6

3.1

31.6

42.8

Minor BPS

39.7

-0.7

1.9

52.49

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043002

57985619 - 57995225

9607