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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58079088_58079199_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58079088 - 58079199

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAA

U12 Branch Point Sequence:

TGTTTTTTAAAG

Flanking Amino Acid:

PDIKNMFGVVGSTTSTCLLF

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

58.6

0.22

1.1

59.7

34.6

Major PPT

76.6

0.6

77.9

34.4

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

66.7

0.39

1.4

68.86

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007812

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008104

58077753 - 58097966

20214

ENSAPLT00000043727

58077753 - 58097964

20212