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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58092368_58092406_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

58092368 - 58092406

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTACTTTGC

5'SS Class:

weak_major

3'SS Sequence:

AATCAGTGCACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

GGTAAGTTAAAA

Flanking Amino Acid:

YTSSLSFFFMVLSIFFSLII

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.4

0.08

1.2

50.1

41.8

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

57.8

0.18

1.1

49.7

42.8

Minor 5ss

41.5

-0.9

52.7

44.5

Minor BPS

44.4

-0.4

2.2

56.56

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007812

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043727

58077753 - 58097964

20212