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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58093003_58097887_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58093003 - 58097887

Intron Length:

4885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAT

U12 Branch Point Sequence:

GCTTTTCCAACA

Flanking Amino Acid:

VAGFLSGDESGSWYLDGRLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

69.4

0.48

1.2

71.6

36.4

Major PPT

74.8

0.56

0.9

70.1

35.3

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

47.9

-0.1

1.8

60.42

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007812

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043727

58077753 - 58097964

20212

ENSAPLT00000008104

58077753 - 58097966

20214