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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58158547_58159660_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

58158547 - 58159660

Intron Length:

1114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TAAACTTGGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

CAAATATTAATT

Flanking Amino Acid:

VPELEMLGRLGARFSLHHLF

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

58.2

0.19

1.2

54.3

45.1

Minor 5ss

-1.5

2.8

43.1

43.9

Minor BPS

50.3

0.09

1.6

63.66

40.5

Associated Gene:

Gene:

MNAT1

Ensembl Gene ID:

ENSAPLG00000008083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023246

58157948 - 58226047

68100

ENSAPLT00000008397

58157364 - 58226047

68684