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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58159783_58189077_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58159783 - 58189077

Intron Length:

29295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTCCTTTAACA

Flanking Amino Acid:

PVTFSTGIKMGQHISLAPIQ

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.8

39.2

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

0.76

0.8

80.8

29.7

Minor 5ss

34.7

-1.7

3.2

46.8

42.3

Minor BPS

84.5

1.08

88.93

Associated Gene:

Gene:

MNAT1

Ensembl Gene ID:

ENSAPLG00000008083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023246

58157948 - 58226047

68100

ENSAPLT00000008397

58157364 - 58226047

68684