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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58207921_58209595_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58207921 - 58209595

Intron Length:

1675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TGTTATATAAAT

Flanking Amino Acid:

EVEIRKKVLKIYNKREDDFP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

77.8

30.2

Major BPS

74.5

0.61

79.6

29.1

Major PPT

76.4

0.59

78.2

Minor 5ss

34.2

-1.8

3.4

41.4

Minor BPS

52.8

0.16

1.9

76.4

39.4

Associated Gene:

Gene:

MNAT1

Ensembl Gene ID:

ENSAPLG00000008083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023246

58157948 - 58226047

68100

ENSAPLT00000008397

58157364 - 58226047

68684