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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58209749_58226036_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58209749 - 58226036

Intron Length:

16288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

GCCTTCTTACTC

Flanking Amino Acid:

MPCRCESCVELLF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

38.4

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

0.74

0.7

81.1

Minor 5ss

28.1

-2.5

2.7

31.4

42.8

Minor BPS

53.2

0.08

1.6

57.67

42.1

Associated Gene:

Gene:

MNAT1

Ensembl Gene ID:

ENSAPLG00000008083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023246

58157948 - 58226047

68100

ENSAPLT00000008397

58157364 - 58226047

68684