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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5823737_5841696_R

Intron Information:

Intron Rank:

130405

Intron Class:

major

Intron Phase:

Intron Coordinates:

5823737 - 5841696

Intron Length:

17960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTATTGCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GTTTTCTACACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.3

75.3

40.8

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

80.1

0.68

0.9

74.1

36.4

Minor 5ss

32.3

-2

2.8

43.1

43.7

Minor BPS

49.6

-0.1

2.2

63.23

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030117

5823212 - 5846361

23150