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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58277663_58278443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58277663 - 58278443

Intron Length:

781

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTGAG

5'SS Class:

major

3'SS Sequence:

GTGCCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTAAC

U12 Branch Point Sequence:

CCCCCGGTAACT

Flanking Amino Acid:

QRDRAAEAKERENTENSNAA

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

1.1

65.3

40.7

Major BPS

48.8

-0

1.3

50.7

41.5

Major PPT

68.5

0.42

0.9

61.8

34.8

Minor 5ss

-2.2

3.3

40.3

45.8

Minor BPS

43.1

-0.4

2.6

60.38

Associated Gene:

Gene:

SIX1

Ensembl Gene ID:

ENSAPLG00000008206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008513

58277103 - 58278732

1630