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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58283080_58285920_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

58283080 - 58285920

Intron Length:

2841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGCCTTGG

5'SS Class:

weak_major

3'SS Sequence:

TGGTGCAGCTCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTACGAA

U12 Branch Point Sequence:

TCTGGTGCAGCT

Flanking Amino Acid:

SLSKACCWACASV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.2

0.17

1.2

48.1

44.9

Major BPS

52.8

0.07

1.3

52.8

42.7

Major PPT

58.9

0.2

1.1

55.1

44.6

Minor 5ss

39.1

-1.2

48.7

47.5

Minor BPS

35.4

-1

2.4

54.98

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032062

58283071 - 58286175

3105