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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58321502_58323012_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

58321502 - 58323012

Intron Length:

1511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTTGAA

5'SS Class:

major

3'SS Sequence:

ACAATTACTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTCTTCACAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

70.4

35.6

Major BPS

81.6

0.78

0.8

24.9

Major PPT

66.3

0.37

55.8

43.7

Minor 5ss

30.7

-2.2

3.4

46.1

Minor BPS

55.1

0.24

1.8

76.59

40.4

Associated Gene:

Gene:

C14orf39

Ensembl Gene ID:

ENSAPLG00000004918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005081

58321375 - 58348670

27296