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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58326753_58331336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58326753 - 58331336

Intron Length:

4584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGC|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

ACTTTCTCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

ACTTTCTCAACA

Flanking Amino Acid:

QNENSKDSCNAWKPTYAILS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.3

71.6

40.2

Major BPS

76.3

0.65

67.3

39.3

Major PPT

75.1

0.56

0.9

70.4

34.4

Minor 5ss

-1.5

2.6

39.4

38.9

Minor BPS

67.4

0.54

1.5

73.6

38.2

Associated Gene:

Gene:

C14orf39

Ensembl Gene ID:

ENSAPLG00000004918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005081

58321375 - 58348670

27296