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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58337123_58340149_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58337123 - 58340149

Intron Length:

3027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TAATTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATTGCCTTAATT

Flanking Amino Acid:

SLEKPKNFKERIFEESEHPS

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

85.8

25.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

82.6

0.73

0.8

81.6

35.5

Minor 5ss

49.9

-0

2.4

66.7

44.7

Minor BPS

80.9

1.05

1.2

90.25

33.9

Associated Gene:

Gene:

C14orf39

Ensembl Gene ID:

ENSAPLG00000004918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005081

58321375 - 58348670

27296