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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58342421_58343528_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58342421 - 58343528

Intron Length:

1108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTTGTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACAAT

U12 Branch Point Sequence:

GTTGTTACAATA

Flanking Amino Acid:

QQFESEDTAIEDQEAKCDDK

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.6

1.1

0.7

87.9

25.6

Major BPS

65.2

0.38

1.3

73.4

38.5

Major PPT

76.9

0.61

0.9

72.9

36.9

Minor 5ss

-1.5

2.6

46.5

41.8

Minor BPS

44.8

-0.3

1.8

56.42

37.2

Associated Gene:

Gene:

C14orf39

Ensembl Gene ID:

ENSAPLG00000004918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005081

58321375 - 58348670

27296