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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58345466_58346869_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58345466 - 58346869

Intron Length:

1404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AATTTGTTAAAT

Flanking Amino Acid:

VFGAEHSSDETDDNYPVGHL

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

82.5

0.73

0.9

80.2

37.3

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

56.1

0.27

2.1

76.59

39.6

Associated Gene:

Gene:

C14orf39

Ensembl Gene ID:

ENSAPLG00000004918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005081

58321375 - 58348670

27296