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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58414707_58417006_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58414707 - 58417006

Intron Length:

2300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

TTTTTCTTTAAG

Flanking Amino Acid:

RLNPYRNDDTDSASTDDMW*

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

78.6

35.6

Major BPS

0.7

0.9

79.6

29.1

Major PPT

85.8

0.8

0.9

91.3

Minor 5ss

43.2

-0.7

2.9

64.8

39.3

Minor BPS

62.2

0.24

1.8

72.26

40.2

Associated Gene:

Gene:

PPM1A

Ensembl Gene ID:

ENSAPLG00000005121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027614

58413763 - 58440323

26561

ENSAPLT00000005294

58413763 - 58440323

26561