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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58417065_58419128_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58417065 - 58419128

Intron Length:

2064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCCCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

GTTTCTTGAATT

Flanking Amino Acid:

NLPPGGELASKRSVIEAVYN

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

76.5

27.6

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

78.6

0.64

0.8

Minor 5ss

36.7

-1.5

2.8

41.8

38.8

Minor BPS

0.8

1.3

85.63

34.4

Associated Gene:

Gene:

PPM1A

Ensembl Gene ID:

ENSAPLG00000005121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027614

58413763 - 58440323

26561

ENSAPLT00000005294

58413763 - 58440323

26561