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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58426927_58439643_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

58426927 - 58439643

Intron Length:

12717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

AATATCTTAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

67.1

44.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

93.4

0.98

0.6

92.1

18.5

Minor 5ss

31.6

-2.1

3.1

31.9

42.5

Minor BPS

68.7

0.57

1.2

70.52

34.3

Associated Gene:

Gene:

PPM1A

Ensembl Gene ID:

ENSAPLG00000005121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005294

58413763 - 58440323

26561

ENSAPLT00000027614

58413763 - 58440323

26561