Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_58476950_58478303_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58476950 - 58478303

Intron Length:

1354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGACT

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTCCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

CTCATTTTACTC

Flanking Amino Acid:

QNVFTENLAKSLENSGDQSH

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.98

0.8

85.2

31.7

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

75.1

0.56

0.8

65.7

Minor 5ss

34.9

-1.7

3.2

49.5

46.5

Minor BPS

47.7

-0.2

1.6

53.22

39.7

Associated Gene:

Gene:

DHRS7

Ensembl Gene ID:

ENSAPLG00000005318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022629

58450331 - 58478570

28240

ENSAPLT00000032832

58445324 - 58479261

33938

ENSAPLT00000022388

58445324 - 58478570

33247

ENSAPLT00000026395

58446395 - 58478570

32176

ENSAPLT00000021464

58460541 - 58637738

177198

ENSAPLT00000026029

58460541 - 58584810

124270

ENSAPLT00000005503

58460541 - 58478570

18030

ENSAPLT00000024697

58451689 - 58478570

26882