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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5847828_5848072_F

Intron Information:

Intron Rank:

127202

Intron Class:

major

Intron Phase:

Intron Coordinates:

5847828 - 5848072

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGGAATTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTTTTCATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

1.2

90.9

28.7

Major BPS

100

1.24

0.5

100

Major PPT

68.5

0.42

61.5

44.2

Minor 5ss

37.1

-1.5

2.8

51.6

44.9

Minor BPS

56.6

0.29

1.8

77.97

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027778

5847648 - 5849478

1831