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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58484042_58484528_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58484042 - 58484528

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACAGA

5'SS Class:

strong_major

3'SS Sequence:

CTGTACGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

TCTTTCTGTACG

Flanking Amino Acid:

ELFQLALKAFRYTFKLMVDK

Intron Amino Acid Position:

1002

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

71.3

40.5

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

73.5

0.53

69.3

41.4

Minor 5ss

38.1

-1.3

49.1

46.7

Minor BPS

53.7

-0

1.9

63.64

44.1

Associated Gene:

Gene:

PCNX4

Ensembl Gene ID:

ENSAPLG00000005544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036323

58481836 - 58494265

12430

ENSAPLT00000005747

58483232 - 58493599

10368