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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58489363_58489511_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58489363 - 58489511

Intron Length:

149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATTCAA

5'SS Class:

major

3'SS Sequence:

ATCTCCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GCATTTTTAAAT

Flanking Amino Acid:

CIGFTRIFRMVWQNTENALL

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

68.7

37.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.54

0.8

71.1

33.8

Minor 5ss

33.7

-1.9

2.9

38.1

Minor BPS

61.6

0.44

1.4

70.2

40.7

Associated Gene:

Gene:

PCNX4

Ensembl Gene ID:

ENSAPLG00000005544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036323

58481836 - 58494265

12430

ENSAPLT00000005747

58483232 - 58493599

10368