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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58490931_58491021_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58490931 - 58491021

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAATTTT

5'SS Class:

major

3'SS Sequence:

TTCTCCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTCCTTCACA

Flanking Amino Acid:

LGGSPMSSNTKLLVMFLISA

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

27.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.3

0.77

0.7

79.4

26.1

Minor 5ss

47.2

-0.3

2.9

66.9

38.4

Minor BPS

74.9

0.78

1.7

83.03

38.2

Associated Gene:

Gene:

PCNX4

Ensembl Gene ID:

ENSAPLG00000005544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036323

58481836 - 58494265

12430