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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58522312_58524723_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58522312 - 58524723

Intron Length:

2412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATAT

Flanking Amino Acid:

TSQLNQSNQQEASQ*

Intron Amino Acid Position:

1474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

94.6

0.6

88.2

29.1

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

58.3

0.34

1.7

76.11

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021248

58522297 - 58569039

46743

ENSAPLT00000005762

58522297 - 58569087

46791

ENSAPLT00000029771

58522297 - 58569087

46791