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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58525580_58529203_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

58525580 - 58529203

Intron Length:

3624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATAGCAA

5'SS Class:

major

3'SS Sequence:

CCCCCTTATGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTCCCCCTTATG

Flanking Amino Acid:

LKADYQCLEQDFQAANSPKN

Intron Amino Acid Position:

1362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.1

54.5

38.1

Major BPS

78.2

0.7

77.9

32.1

Major PPT

51.3

0.03

1.7

60.5

34.2

Minor 5ss

37.2

-1.4

3.4

Minor BPS

47.6

-0.3

57.83

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021248

58522297 - 58569039

46743

ENSAPLT00000005762

58522297 - 58569087

46791

ENSAPLT00000029771

58522297 - 58569087

46791