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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58529327_58531158_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58529327 - 58531158

Intron Length:

1832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

TTTCTTTATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTTCTTTATAC

Flanking Amino Acid:

LKVLSVRGNPVSLKKNYRSL

Intron Amino Acid Position:

1298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

71.9

39.5

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

88.1

0.86

0.8

84.3

29.6

Minor 5ss

36.1

-1.6

2.9

48.1

41.6

Minor BPS

67.8

0.54

1.7

79.48

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029771

58522297 - 58569087

46791

ENSAPLT00000021248

58522297 - 58569039

46743