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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58535364_58535716_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58535364 - 58535716

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATTCATTTGATC

Flanking Amino Acid:

SGLIFLPNVKVLCLNYNQIE

Intron Amino Acid Position:

1156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.7

82.8

24.2

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

71.9

0.49

1.1

33.3

Minor 5ss

-1.7

2.7

41.6

Minor BPS

55.6

0.16

1.4

66.16

32.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005762

58522297 - 58569087

46791

ENSAPLT00000029771

58522297 - 58569087

46791

ENSAPLT00000021248

58522297 - 58569039

46743