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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58550473_58551458_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58550473 - 58551458

Intron Length:

986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCACTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATAAT

U12 Branch Point Sequence:

GTTTCCTCCACT

Flanking Amino Acid:

LGSDTSTSSNGLWASLEQKS

Intron Amino Acid Position:

599

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

67.7

0.44

1.1

67.9

34.4

Major PPT

77.4

0.62

0.8

74.1

29.4

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

64.6

0.54

85.32

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005762

58522297 - 58569087

46791

ENSAPLT00000029771

58522297 - 58569087

46791

ENSAPLT00000021248

58522297 - 58569039

46743