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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58558510_58559757_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

58558510 - 58559757

Intron Length:

1248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTATGTTTA

5'SS Class:

weak_major

3'SS Sequence:

TTTCTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATTAT

U12 Branch Point Sequence:

GATACATTATTC

Flanking Amino Acid:

RITFWNRKLDEIEKDYQMEI

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

70.4

36.3

Major BPS

63.3

0.33

1.1

41.2

Major PPT

95.4

1.02

0.5

91.9

18.9

Minor 5ss

54.1

0.14

2.3

62.7

43.1

Minor BPS

48.1

-0.1

1.9

58.75

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029771

58522297 - 58569087

46791

ENSAPLT00000021248

58522297 - 58569039

46743

ENSAPLT00000005762

58522297 - 58569087

46791