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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58562892_58564641_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58562892 - 58564641

Intron Length:

1750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ATTGTTGTGATA

Flanking Amino Acid:

LSGNKLSSFKELTSLSRLPN

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

29.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

92.6

0.96

0.7

88.3

28.9

Minor 5ss

46.6

-0.4

2.4

59.3

45.3

Minor BPS

45.4

-0.3

58.59

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029771

58522297 - 58569087

46791

ENSAPLT00000021248

58522297 - 58569039

46743

ENSAPLT00000005762

58522297 - 58569087

46791