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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58566865_58567405_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58566865 - 58567405

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

TCTTCTTCTATT

Flanking Amino Acid:

ELWIAECCLVKIDGLQKCVH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

66.1

0.4

31.5

Major PPT

86.3

0.82

0.7

81.3

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

55.4

0.25

1.9

75.66

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029771

58522297 - 58569087

46791

ENSAPLT00000021248

58522297 - 58569039

46743

ENSAPLT00000005762

58522297 - 58569087

46791