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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58676303_58686816_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

58676303 - 58686816

Intron Length:

10514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATTATAT

5'SS Class:

weak_major

3'SS Sequence:

CTTCTCTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

CTGCCTTTAACA

Flanking Amino Acid:

DCLWSNWKCQAIDLLYWRDI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.1

63.2

37.6

Major BPS

0.52

1.1

77.7

35.3

Major PPT

80.7

0.69

0.7

31.8

Minor 5ss

45.3

-0.5

2.9

56.2

Minor BPS

70.8

0.65

1.3

72.37

Associated Gene:

Gene:

RTN1

Ensembl Gene ID:

ENSAPLG00000014979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015661

58676242 - 58691635

15394