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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58687025_58687925_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58687025 - 58687925

Intron Length:

901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

GGGTTTGTAACC

Flanking Amino Acid:

VQKTDEGHPFKAYLDMEMNL

Intron Amino Acid Position:

585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

77.7

30.1

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

73.1

0.52

1.1

69.6

41.6

Minor 5ss

31.6

-2.1

3.2

41.8

38.8

Minor BPS

48.9

-0.1

58.84

40.5

Associated Gene:

Gene:

RTN1

Ensembl Gene ID:

ENSAPLG00000014979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032449

58646103 - 58691635

45533

ENSAPLT00000015661

58676242 - 58691635

15394

ENSAPLT00000005790

58589538 - 58691635

102098