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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58714154_58715117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58714154 - 58715117

Intron Length:

964

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTATTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

ATGTCCTTATTT

Flanking Amino Acid:

KEDFDKELEKAKEYLQNAEC

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

26.4

Major BPS

78.8

0.72

67.9

40.1

Major PPT

80.5

0.69

0.8

73.3

36.1

Minor 5ss

32.1

-2

3.5

46.6

48.7

Minor BPS

70.3

0.71

1.6

82.19

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015326

58701321 - 58730040

28720