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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58730793_58731089_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58730793 - 58731089

Intron Length:

297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTCATTTTGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTGTGTTCATTT

Flanking Amino Acid:

AVYMSASEVESFKDLLVRKK

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

84.8

0.86

85.7

34.9

Major PPT

77.8

0.63

72.6

42.2

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

45.9

-0.2

2.1

67.33

44.4

Associated Gene:

Gene:

JKAMP

Ensembl Gene ID:

ENSAPLG00000014595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004567

58730574 - 58734439

3866

ENSAPLT00000015224

58730533 - 58734279

3747