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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58731167_58731700_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58731167 - 58731700

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTTCT

5'SS Class:

major

3'SS Sequence:

CATTTGCCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

ATGTGTTTAACA

Flanking Amino Acid:

VLQAVGGGLLYYAFPYIILV

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

70.8

35.4

Major BPS

0.52

1.1

77.7

35.3

Major PPT

73.7

0.53

0.9

70.5

35.9

Minor 5ss

40.3

-1.1

60.6

43.7

Minor BPS

0.47

1.8

73.21

39.1

Associated Gene:

Gene:

JKAMP

Ensembl Gene ID:

ENSAPLG00000014595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015224

58730533 - 58734279

3747

ENSAPLT00000004567

58730574 - 58734439

3866