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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58731883_58732462_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58731883 - 58732462

Intron Length:

580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTGGA

5'SS Class:

major

3'SS Sequence:

CTGTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

AATTTCTTATTT

Flanking Amino Acid:

VHCTHEAVYPLYTIVFIYYA

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

61.8

38.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

88.3

0.86

0.7

Minor 5ss

29.5

-2.3

3.2

40.9

45.4

Minor BPS

66.2

0.59

1.5

79.09

37.2

Associated Gene:

Gene:

JKAMP

Ensembl Gene ID:

ENSAPLG00000014595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015224

58730533 - 58734279

3747

ENSAPLT00000004567

58730574 - 58734439

3866