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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58734077_58734187_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58734077 - 58734187

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTGCG

5'SS Class:

major

3'SS Sequence:

GTGCTTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

TCCGCTGTGACC

Flanking Amino Acid:

GSVETYGDCGVCPRGQRTDE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

61.3

42.1

Major BPS

0.22

1.2

52.4

43.3

Major PPT

71.9

0.49

0.9

65.8

Minor 5ss

31.2

-2.2

3.3

32.4

42.3

Minor BPS

46.4

-0.3

2.1

56.39

43.4

Associated Gene:

Gene:

JKAMP

Ensembl Gene ID:

ENSAPLG00000014595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015224

58730533 - 58734279

3747

ENSAPLT00000004567

58730574 - 58734439

3866