Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_58735625_58735703_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58735625 - 58735703

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCAC

5'SS Class:

major

3'SS Sequence:

GTGCCGTTCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

TGTTCACAAACC

Flanking Amino Acid:

SAVTEAVKKQFPLHHPESED

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.9

42.4

Major BPS

68.5

0.46

75.3

29.8

Major PPT

67.1

0.39

57.2

43.2

Minor 5ss

29.7

-2.3

3.5

40.5

Minor BPS

48.6

-0.1

2.2

69.44

41.4

Associated Gene:

Gene:

L3HYPDH

Ensembl Gene ID:

ENSAPLG00000028035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044884

58734586 - 58736559

1974