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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58838835_58841090_F

Intron Information:

Intron Rank:

126112

Intron Class:

major

Intron Phase:

Intron Coordinates:

58838835 - 58841090

Intron Length:

2256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TGTCCCTCAGAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

62.5

42.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

75.8

0.58

75.2

33.5

Minor 5ss

35.9

-1.6

3.3

47.1

48.3

Minor BPS

49.9

0.07

1.9

72.72

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017949

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021522

58838382 - 58842004

3623