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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58838835_58850354_F

Intron Information:

Intron Rank:

126113

Intron Class:

major

Intron Phase:

Intron Coordinates:

58838835 - 58850354

Intron Length:

11520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTATTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAC

U12 Branch Point Sequence:

TGGGTCTGACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

62.5

42.3

Major BPS

57.3

0.18

1.2

38.7

Major PPT

86.4

0.82

0.8

80.8

36.4

Minor 5ss

35.9

-1.6

3.3

47.1

48.3

Minor BPS

46.4

-0.2

1.8

55.12

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017949

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042623

58838382 - 58851489

13108