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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58899196_58912198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58899196 - 58912198

Intron Length:

13003

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

CTTTGTTTCACT

Flanking Amino Acid:

KWQIYCSKKKDQEENKGATS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

72.3

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

78.1

0.63

0.7

72.1

Minor 5ss

32.4

-2

3.4

41.9

39.1

Minor BPS

55.3

0.25

2.2

78.9

Associated Gene:

Gene:

DAAM1

Ensembl Gene ID:

ENSAPLG00000013283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041843

58852098 - 58937695

85598

ENSAPLT00000022235

58852098 - 58937695

85598

ENSAPLT00000013897

58865469 - 58937695

72227