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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58912271_58912979_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58912271 - 58912979

Intron Length:

709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TTTCCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

ATTTTTGCCACT

Flanking Amino Acid:

YIDQLNSMAARKSLIALEKE

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

80.3

34.1

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

89.5

0.89

0.6

84.5

23.1

Minor 5ss

39.1

-1.2

3.1

61.3

Minor BPS

43.2

-0.4

2.4

69.47

42.1

Associated Gene:

Gene:

DAAM1

Ensembl Gene ID:

ENSAPLG00000013283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041843

58852098 - 58937695

85598

ENSAPLT00000022235

58852098 - 58937695

85598

ENSAPLT00000013897

58865469 - 58937695

72227