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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58913075_58914729_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58913075 - 58914729

Intron Length:

1655

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAATTCTC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTGATTTTAAAA

Flanking Amino Acid:

LKTALRTKPMRFVTRFIDLD

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

1.1

81.3

35.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

75.2

0.57

0.9

72.2

32.4

Minor 5ss

28.5

-2.5

3.9

44.3

43.4

Minor BPS

61.4

0.35

1.4

68.66

37.7

Associated Gene:

Gene:

DAAM1

Ensembl Gene ID:

ENSAPLG00000013283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013897

58865469 - 58937695

72227

ENSAPLT00000041843

58852098 - 58937695

85598

ENSAPLT00000022235

58852098 - 58937695

85598