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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58915064_58915564_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58915064 - 58915564

Intron Length:

501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTGGGTTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

GGGCTCTTAACT

Flanking Amino Acid:

KYASERTRFQTLINDLDKST

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

77.1

0.67

77.9

32.2

Major PPT

62.7

0.29

1.2

56.8

47.6

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

68.1

0.65

1.3

74.91

41.4

Associated Gene:

Gene:

DAAM1

Ensembl Gene ID:

ENSAPLG00000013283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041843

58852098 - 58937695

85598

ENSAPLT00000022235

58852098 - 58937695

85598

ENSAPLT00000013897

58865469 - 58937695

72227